Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS22120 | Not Available | Negative | 140766 - 141104 | 12645.0 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS22125 | Not Available | Positive | 141258 - 142554 | 48865.9 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS23890 | Not Available | Negative | 142764 - 143595 | 30210.6 |
| hypothetical protein | SAMIE_RS24020 | Not Available | Negative | 143693 - 143818 | 4252.45 |
| cbb3-type cytochrome oxidase assembly protein ccos | SAMIE_RS22145 | Not Available | Negative | 143858 - 144067 | 7602.03 |
| heavy metal translocating p-type atpase | SAMIE_RS22150 | Not Available | Negative | 144064 - 146325 | 79548.6 |
| duf2189 domain-containing protein | SAMIE_RS22155 | Not Available | Negative | 146328 - 147146 | 29525.9 |
| cytochrome-c oxidase, cbb3-type subunit iii | SAMIE_RS22165 | Not Available | Negative | 147345 - 148223 | 32399.3 |
| cbb3-type cytochrome c oxidase subunit 3 | SAMIE_RS22170 | Not Available | Negative | 148214 - 148384 | 6462.84 |
| cytochrome-c oxidase, cbb3-type subunit ii | SAMIE_RS22175 | Not Available | Negative | 148400 - 149152 | 27725.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

