Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein b | SAMIE_RS22070 | Not Available | Positive | 131779 - 132966 | 42551.3 |
| duf305 domain-containing protein | SAMIE_RS22075 | Not Available | Positive | 133057 - 133530 | 17642.2 |
| pas domain s-box protein | SAMIE_RS22080 | Not Available | Positive | 133590 - 135125 | 56379.2 |
| response regulator transcription factor | SAMIE_RS22085 | Not Available | Positive | 135115 - 135738 | 22184.0 |
| response regulator | SAMIE_RS22090 | Not Available | Positive | 135820 - 136227 | 15121.3 |
| magnesium/cobalt transporter cora | SAMIE_RS22095 | Not Available | Negative | 136289 - 137257 | 36341.3 |
| sdr family oxidoreductase | SAMIE_RS22100 | Not Available | Negative | 137707 - 138537 | 29442.0 |
| tetr family transcriptional regulator | SAMIE_RS22105 | Not Available | Positive | 138607 - 139173 | 20793.0 |
| pepsy-associated tm helix domain-containing protein | SAMIE_RS22110 | Not Available | Negative | 139381 - 139926 | 20443.4 |
| single-stranded dna-binding protein | SAMIE_RS22115 | Not Available | Negative | 140043 - 140450 | 15187.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

