Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS23535 | Not Available | Negative | 123270 - 123491 | 7607.47 |
| cu(i)-responsive transcriptional regulator | SAMIE_RS22025 | Not Available | Negative | 123485 - 123883 | 14842.8 |
| heavy metal translocating p-type atpase | SAMIE_RS22030 | Not Available | Negative | 123880 - 126237 | 82049.0 |
| class i sam-dependent methyltransferase | SAMIE_RS22035 | Not Available | Negative | 126345 - 127019 | 24328.4 |
| copper homeostasis membrane protein copd | SAMIE_RS22040 | Not Available | Negative | 127056 - 128000 | 32540.8 |
| copper homeostasis periplasmic binding protein copc | SAMIE_RS22045 | Not Available | Negative | 128005 - 128382 | 13081.1 |
| hypothetical protein | SAMIE_RS22050 | Not Available | Positive | 128515 - 128787 | 9401.46 |
| periplasmic heavy metal sensor | SAMIE_RS22055 | Not Available | Positive | 128787 - 129224 | 16240.7 |
| rna polymerase sigma factor | SAMIE_RS22060 | Not Available | Positive | 129221 - 129787 | 20825.1 |
| copper resistance system multicopper oxidase | SAMIE_RS22065 | Not Available | Positive | 129854 - 131782 | 69587.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

