Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit a | SAMIE_RS21970 | Not Available | Negative | 114201 - 114902 | 24980.3 |
| atp synthase subunit i | SAMIE_RS21975 | Not Available | Negative | 114899 - 115165 | 9199.67 |
| atpz/atpi family protein | SAMIE_RS21980 | Not Available | Negative | 115162 - 115437 | 10317.8 |
| f0f1 atp synthase subunit epsilon | SAMIE_RS21985 | Not Available | Negative | 115434 - 115844 | 14455.1 |
| f0f1 atp synthase subunit beta | SAMIE_RS21990 | Not Available | Negative | 115841 - 117253 | 49600.9 |
| hypothetical protein | SAMIE_RS21995 | Not Available | Positive | 117529 - 117948 | 14400.9 |
| enoyl-acp reductase fabi | SAMIE_RS22000 | Not Available | Negative | 117976 - 118749 | 27102.7 |
| acetate/propionate family kinase | SAMIE_RS22005 | Not Available | Negative | 118746 - 119936 | 41844.2 |
| bifunctional enoyl-coa hydratase/phosphate acetyltransferase | SAMIE_RS22010 | Not Available | Negative | 119929 - 121356 | 49464.9 |
| pha/phb synthase family protein | SAMIE_RS22015 | Not Available | Negative | 121360 - 123081 | 63492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

