Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase family protein | SAMIE_RS21925 | Not Available | Positive | 104873 - 106411 | 53284.0 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS21930 | Not Available | Positive | 106408 - 107314 | 32914.6 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS21935 | Not Available | Positive | 107462 - 107658 | 7318.8 |
| hypothetical protein | SAMIE_RS23885 | Not Available | Positive | 107632 - 107907 | 9998.88 |
| response regulator transcription factor | SAMIE_RS21940 | Not Available | Positive | 108252 - 108872 | 22267.1 |
| oleate hydratase | SAMIE_RS21945 | Not Available | Negative | 109016 - 110782 | 66507.3 |
| f0f1 atp synthase subunit gamma | SAMIE_RS21950 | Not Available | Negative | 110862 - 111710 | 30258.3 |
| f0f1 atp synthase subunit alpha | SAMIE_RS21955 | Not Available | Negative | 111707 - 113227 | 54039.1 |
| hypothetical protein | SAMIE_RS21960 | Not Available | Negative | 113211 - 113960 | 26871.0 |
| f0f1 atp synthase subunit c | SAMIE_RS21965 | Not Available | Negative | 113962 - 114204 | 8271.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

