Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf411 domain-containing protein | YGS_RS20615 | Not Available | Negative | 788779 - 789222 | 15439.9 |
| duf305 domain-containing protein | YGS_RS20620 | Not Available | Negative | 789291 - 789764 | 17683.3 |
| copper resistance protein b | YGS_RS20625 | Not Available | Negative | 789823 - 790968 | 41768.7 |
| copper resistance system multicopper oxidase | YGS_RS20630 | Not Available | Negative | 790965 - 792944 | 71422.6 |
| rna polymerase sigma factor | YGS_RS20635 | Not Available | Negative | 792993 - 793556 | 20921.3 |
| periplasmic heavy metal sensor | YGS_RS20640 | Not Available | Negative | 793553 - 793993 | 16066.5 |
| hypothetical protein | YGS_RS20645 | Not Available | Negative | 793990 - 794268 | 9324.35 |
| copper homeostasis periplasmic binding protein copc | YGS_RS20650 | Not Available | Positive | 794401 - 794787 | 13160.2 |
| copper homeostasis membrane protein copd | YGS_RS20655 | Not Available | Positive | 794788 - 795714 | 32112.4 |
| heavy metal translocating p-type atpase | YGS_RS20660 | Not Available | Positive | 795781 - 798153 | 82652.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

