Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | YGS_RS15905 | Not Available | Negative | 3248020 - 3248358 | 13387.0 |
| type ii crispr-associated endonuclease cas1 | YGS_RS15910 | Not Available | Negative | 3248355 - 3249278 | 32696.4 |
| type ii crispr rna-guided endonuclease cas9 | YGS_RS15915 | Not Available | Negative | 3249301 - 3252600 | 124341.0 |
| ggdef domain-containing protein | YGS_RS15920 | Not Available | Positive | 3253005 - 3254168 | 41642.0 |
| hypothetical protein | YGS_RS15925 | Not Available | Negative | 3254179 - 3254475 | 10797.3 |
| lrp/asnc family transcriptional regulator | YGS_RS15930 | Not Available | Negative | 3254663 - 3255148 | 17655.3 |
| dmt family transporter | YGS_RS15935 | Not Available | Positive | 3255242 - 3256201 | 33761.3 |
| fluoride efflux transporter crcb | YGS_RS15940 | Not Available | Positive | 3256327 - 3256713 | 12891.2 |
| rlua family pseudouridine synthase | YGS_RS15945 | Not Available | Positive | 3256710 - 3258110 | 50772.9 |
| fmn-binding negative transcriptional regulator | YGS_RS15950 | Not Available | Positive | 3258125 - 3258742 | 22290.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

