Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | YGS_RS14860 | Not Available | Positive | 3026158 - 3027036 | 31109.9 |
| ssra-binding protein smpb | YGS_RS14865 | Not Available | Positive | 3027098 - 3027580 | 18519.3 |
| duf2062 domain-containing protein | YGS_RS14870 | Not Available | Positive | 3027584 - 3028177 | 21632.8 |
| atp-binding protein | YGS_RS14875 | Not Available | Positive | 3028239 - 3030623 | 84992.2 |
| response regulator | YGS_RS14880 | Not Available | Positive | 3030709 - 3031065 | 12379.9 |
| recombinase reca | YGS_RS14885 | Not Available | Positive | 3031189 - 3032262 | 38233.1 |
| transglutaminase-like domain-containing protein | YGS_RS14890 | Not Available | Positive | 3032735 - 3033523 | 28272.6 |
| translocation/assembly module tamb domain-containing protein | YGS_RS14895 | Not Available | Negative | 3033666 - 3037886 | 147371.0 |
| autotransporter assembly complex protein tama | YGS_RS14900 | Not Available | Negative | 3037886 - 3040030 | 76467.9 |
| single-stranded-dna-specific exonuclease recj | YGS_RS14905 | Not Available | Positive | 3040170 - 3041936 | 61851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

