Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YGS_RS12835 | Not Available | Negative | 2614445 - 2614912 | 17082.8 |
| duf1674 domain-containing protein | YGS_RS12840 | Not Available | Negative | 2615086 - 2615259 | 6332.44 |
| zinc metalloprotease htpx | YGS_RS12845 | Not Available | Positive | 2615350 - 2616303 | 33424.5 |
| hypothetical protein | YGS_RS12850 | Not Available | Positive | 2616303 - 2616623 | 11549.3 |
| rsmb/nop family class i sam-dependent rna methyltransferase | YGS_RS12855 | Not Available | Positive | 2616649 - 2617959 | 46500.8 |
| diguanylate cyclase | YGS_RS12860 | Not Available | Positive | 2618010 - 2618501 | 18088.8 |
| ribulose-phosphate 3-epimerase | YGS_RS12865 | Not Available | Positive | 2618625 - 2619287 | 23573.7 |
| heparinase ii/iii family protein | YGS_RS12870 | Not Available | Positive | 2619284 - 2621050 | 63128.1 |
| antitoxin of toxin-antitoxin stability system | YGS_RS12875 | Not Available | Positive | 2621117 - 2621395 | 10287.1 |
| type ii toxin-antitoxin system rele/pare family toxin | YGS_RS12880 | Not Available | Positive | 2621392 - 2621670 | 10649.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

