Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfa family protein | YGS_RS12640 | Not Available | Positive | 2577392 - 2577832 | 15455.3 |
| duf3617 domain-containing protein | YGS_RS12645 | Not Available | Negative | 2577840 - 2578358 | 17845.3 |
| hnh endonuclease | YGS_RS12650 | Not Available | Negative | 2578428 - 2578736 | 11667.1 |
| duf3617 domain-containing protein | YGS_RS12655 | Not Available | Negative | 2578712 - 2579278 | 19974.0 |
| endonuclease domain-containing protein | YGS_RS27285 | Not Available | Positive | 2579697 - 2579765 | 2510.01 |
| dna/rna non-specific endonuclease | YGS_RS27290 | Not Available | Positive | 2580011 - 2580400 | 14365.8 |
| excinuclease abc subunit uvrb | YGS_RS12670 | Not Available | Positive | 2580859 - 2583042 | 81954.8 |
| duf1080 domain-containing protein | YGS_RS12675 | Not Available | Negative | 2583158 - 2583925 | 28237.9 |
| amp-dependent synthetase/ligase | YGS_RS12680 | Not Available | Negative | 2584040 - 2585782 | 63006.0 |
| holliday junction branch migration dna helicase ruvb | YGS_RS12685 | Not Available | Negative | 2585921 - 2586943 | 37177.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

