Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbf | YGS_RS12440 | Not Available | Positive | 2547325 - 2548125 | 29517.7 |
| p-type conjugative transfer protein trbg | YGS_RS12445 | Not Available | Positive | 2548122 - 2548979 | 30572.4 |
| trbi/virb10 family protein | YGS_RS12450 | Not Available | Positive | 2548976 - 2550205 | 42858.0 |
| duf2274 domain-containing protein | YGS_RS12455 | Not Available | Positive | 2550207 - 2550422 | 8001.72 |
| helix-turn-helix domain-containing protein | YGS_RS12460 | Not Available | Positive | 2550429 - 2550626 | 6908.47 |
| tyrosine-type recombinase/integrase | YGS_RS12465 | Not Available | Negative | 2550623 - 2551858 | 46560.4 |
| Trna-leu | Not Available | Not Available | Positive | 2552033 - 2552119 | Not Available |
| alpha/beta fold hydrolase | YGS_RS12475 | Not Available | Positive | 2552307 - 2553074 | 27428.9 |
| tetratricopeptide repeat protein | YGS_RS12480 | Not Available | Positive | 2553074 - 2553946 | 30836.5 |
| hypothetical protein | YGS_RS12485 | Not Available | Positive | 2554035 - 2554277 | 7799.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

