Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | YGS_RS27775 | Not Available | Negative | 361611 - 361973 | 13290.0 |
| toxin-activating lysine-acyltransferase | YGS_RS18565 | Not Available | Negative | 361964 - 362494 | 19633.6 |
| hlyd family type i secretion periplasmic adaptor subunit | YGS_RS18570 | Not Available | Negative | 362543 - 363934 | 49659.1 |
| type i secretion system permease/atpase | YGS_RS18575 | Not Available | Negative | 363931 - 366057 | 77746.9 |
| ribbon-helix-helix protein, copg family | YGS_RS18580 | Not Available | Positive | 366626 - 366913 | 10850.6 |
| type ii toxin-antitoxin system rele/pare family toxin | YGS_RS18585 | Not Available | Positive | 366900 - 368207 | 50294.2 |
| hypothetical protein | YGS_RS18590 | Not Available | Negative | 368264 - 368545 | 10221.1 |
| rna polymerase sigma factor | YGS_RS18595 | Not Available | Positive | 369141 - 369674 | 20964.0 |
| hypothetical protein | YGS_RS27425 | Not Available | Negative | 369663 - 370004 | 13006.0 |
| fecr family protein | YGS_RS18600 | Not Available | Positive | 369966 - 370667 | 25167.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

