Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | YGS_RS04470 | Not Available | Positive | 903906 - 904430 | 19465.1 |
| duf6161 domain-containing protein | YGS_RS04475 | Not Available | Positive | 904522 - 905886 | 49930.1 |
| hu family dna-binding protein | YGS_RS04480 | Not Available | Positive | 905921 - 906214 | 10568.8 |
| hypothetical protein | YGS_RS04485 | Not Available | Negative | 906239 - 909967 | 136589.0 |
| hypothetical protein | YGS_RS04490 | Not Available | Negative | 910113 - 910934 | 30467.4 |
| hypothetical protein | YGS_RS04495 | Not Available | Negative | 910931 - 911119 | 7193.54 |
| sigma-54-dependent transcriptional regulator | YGS_RS04500 | Not Available | Negative | 911712 - 913028 | 47841.4 |
| sensor histidine kinase | YGS_RS04505 | Not Available | Negative | 913025 - 914782 | 63728.1 |
| dicarboxylate/amino acid:cation symporter | YGS_RS04510 | Not Available | Positive | 915039 - 916379 | 46318.6 |
| alginate export family protein | YGS_RS04515 | Not Available | Positive | 916392 - 917873 | 54438.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

