Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atxe2 family lasso peptide isopeptidase | YGS_RS03885 | Not Available | Negative | 776025 - 778067 | 75074.8 |
| tonb-dependent receptor | YGS_RS03890 | Not Available | Negative | 778067 - 780640 | 90379.0 |
| fecr family protein | YGS_RS03895 | Not Available | Negative | 780725 - 781702 | 35182.1 |
| rna polymerase sigma factor | YGS_RS03900 | Not Available | Negative | 781755 - 782321 | 21860.1 |
| sigma factor-like helix-turn-helix dna-binding protein | YGS_RS03905 | Not Available | Positive | 782885 - 783238 | 13311.1 |
| dienelactone hydrolase family protein | YGS_RS03910 | Not Available | Negative | 783337 - 784074 | 26365.3 |
| hypothetical protein | YGS_RS03915 | Not Available | Negative | 784114 - 784401 | 10035.5 |
| dimethylarginine dimethylaminohydrolase family protein | YGS_RS03920 | Not Available | Negative | 784433 - 785344 | 32628.3 |
| dead/deah box helicase | YGS_RS03925 | Not Available | Negative | 785653 - 787878 | 80977.7 |
| atp-binding protein | YGS_RS03930 | Not Available | Negative | 787859 - 789142 | 47606.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

