Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | YGS_RS03215 | Not Available | Negative | 644818 - 645387 | 21245.8 |
| Trna-lys | Not Available | Not Available | Positive | 645450 - 645525 | Not Available |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | YGS_RS03225 | Not Available | Negative | 645568 - 646065 | 18119.0 |
| hypothetical protein | YGS_RS03230 | Not Available | Negative | 646197 - 646457 | 9949.74 |
| n-carbamoylputrescine amidase | YGS_RS03235 | Not Available | Negative | 646464 - 647312 | 31675.5 |
| duf2501 domain-containing protein | YGS_RS03240 | Not Available | Negative | 647391 - 647765 | 12028.8 |
| agmatine deiminase family protein | YGS_RS03245 | Not Available | Negative | 647875 - 648864 | 34963.4 |
| duf6265 family protein | YGS_RS03250 | Not Available | Positive | 648966 - 649427 | 16814.9 |
| hypothetical protein | YGS_RS03255 | Not Available | Negative | 649432 - 649767 | 12242.7 |
| glutathionylspermidine synthase family protein | YGS_RS03260 | Not Available | Negative | 649828 - 650964 | 42610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

