Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase family protein | YGS_RS02420 | Not Available | Positive | 472862 - 473731 | 31277.8 |
| peptidase | YGS_RS02425 | Not Available | Positive | 473811 - 474548 | 27300.9 |
| hypothetical protein | YGS_RS02430 | Not Available | Negative | 474674 - 475345 | 24786.7 |
| comec/rec2 family competence protein | YGS_RS02435 | Not Available | Negative | 475342 - 476205 | 32261.4 |
| thioredoxin-disulfide reductase | YGS_RS02440 | Not Available | Positive | 476834 - 477796 | 34067.9 |
| acyl carrier protein | YGS_RS02445 | Not Available | Negative | 477882 - 478169 | 10381.2 |
| endonuclease domain-containing protein | YGS_RS02450 | Not Available | Negative | 478198 - 479201 | 35463.1 |
| acyl-coa ligase (amp-forming), exosortase a system-associated | YGS_RS02455 | Not Available | Positive | 479287 - 480798 | 53477.4 |
| pyridoxal-dependent decarboxylase, exosortase a system-associated | YGS_RS02460 | Not Available | Positive | 480795 - 482027 | 42699.4 |
| xrta/pep-cterm system exopolysaccharide export protein | YGS_RS02465 | Not Available | Positive | 482160 - 482804 | 23002.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

