Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | YGS_RS02125 | Not Available | Positive | 414301 - 416514 | 80257.4 |
| gamma carbonic anhydrase family protein | YGS_RS02130 | Not Available | Positive | 416528 - 417112 | 20744.0 |
| hypothetical protein | YGS_RS02135 | Not Available | Negative | 417259 - 417771 | 17235.4 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | YGS_RS02140 | Not Available | Negative | 417839 - 418459 | 21216.3 |
| glucokinase | YGS_RS02145 | Not Available | Negative | 418462 - 419436 | 35010.8 |
| phosphogluconate dehydratase | YGS_RS02150 | Not Available | Negative | 419557 - 421383 | 64443.7 |
| glucose-6-phosphate dehydrogenase | YGS_RS02155 | Not Available | Negative | 421376 - 422839 | 53970.5 |
| merc domain-containing protein | YGS_RS02160 | Not Available | Negative | 423011 - 423445 | 15081.6 |
| Trna-leu | Not Available | Not Available | Positive | 423600 - 423684 | Not Available |
| hypothetical protein | YGS_RS02170 | Not Available | Positive | 423764 - 423949 | 6926.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

