Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system secretin trak | YGS_RS17595 | Not Available | Negative | 147385 - 148104 | 25342.3 |
| trae/trak family type iv conjugative transfer system protein | YGS_RS17600 | Not Available | Negative | 148142 - 148777 | 23283.0 |
| type iv conjugative transfer system protein tral | YGS_RS17605 | Not Available | Negative | 148783 - 149049 | 10192.5 |
| hypothetical protein | YGS_RS26940 | Not Available | Negative | 149181 - 149495 | 10621.4 |
| dsbc family protein | YGS_RS17615 | Not Available | Negative | 149692 - 150498 | 28767.4 |
| helix-turn-helix domain-containing protein | YGS_RS17620 | Not Available | Positive | 151432 - 151848 | 15560.8 |
| gntr family transcriptional regulator | YGS_RS17625 | Not Available | Positive | 151875 - 152471 | 22044.7 |
| benenodin family lasso peptide | YGS_RS17630 | Not Available | Positive | 152649 - 152780 | 4697.27 |
| lasso peptide biosynthesis b2 protein | YGS_RS17635 | Not Available | Positive | 152970 - 153482 | 18754.9 |
| asparagine synthetase b family protein | YGS_RS17640 | Not Available | Positive | 153479 - 155236 | 64422.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

