Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YG1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
349326 bp
Thymine Count
349971 bp
Guanine Count
576264 bp
Cytosine Count
571640 bp
Genome Length
1847201 bp
Protein-coding Genes
1590 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose kinase | YGS_RS22170 | Not Available | Negative | 1124894 - 1126135 | 45560.7 |
| acireductone synthase | YGS_RS22175 | Not Available | Negative | 1126132 - 1126818 | 24325.9 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | YGS_RS22180 | Not Available | Negative | 1126815 - 1127366 | 20159.7 |
| methylthioribulose 1-phosphate dehydratase | YGS_RS22185 | Not Available | Negative | 1127363 - 1128016 | 23173.9 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | YGS_RS22190 | Not Available | Positive | 1128250 - 1130682 | 87334.3 |
| hypothetical protein | YGS_RS27025 | Not Available | Positive | 1130690 - 1130833 | 5167.94 |
| gaf domain-containing protein | YGS_RS22195 | Not Available | Positive | 1130833 - 1131366 | 19279.7 |
| hypothetical protein | YGS_RS22200 | Not Available | Positive | 1131603 - 1131911 | 10320.3 |
| response regulator | YGS_RS22205 | Not Available | Positive | 1131908 - 1134730 | 101674.0 |
| diguanylate cyclase | YGS_RS22210 | Not Available | Positive | 1134727 - 1135662 | 33864.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

