Fremyella diplosiphon NIES-3275

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Rivulariaceae

Genus

Microchaete

Description

Fremyella diplosiphon NIES-3275 is characterized by having eight replicons. This organism is notable for its genetic diversity, as evidenced by its multiple accessions, which include NZ_AP018233.1, NZ_AP018234.1, NZ_AP018237.1, NZ_AP018240.1, NZ_AP018241.1, NZ_AP018244.1, NZ_AP018246.1, and NZ_AP018247.1. These accessions suggest a rich genomic framework that may contribute to its adaptability and resilience in various environments. The presence of multiple replicons in F. diplosiphon indicates a complex genomic architecture, which can be advantageous for metabolic versatility and survival under changing conditions. Such genetic diversity can facilitate the organism's ability to respond to environmental stressors and exploit different ecological niches. In terms of ecological significance, F. diplosiphon is known to play a role in aquatic ecosystems, particularly in freshwater environments. Its adaptability and genetic variation may influence its interactions within microbial communities, potentially impacting nutrient cycles and the overall health of the ecosystem. Through its metabolic capabilities, this cyanobacterium can contribute to primary production and the maintenance of biodiversity in its habitat. Thus, understanding the genetic characteristics of F. diplosiphon NIES-3275 can provide insights into its ecological roles and the dynamics of microbial communities in freshwater systems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyRivulariaceae
GenusMicrochaete
SpeciesMicrochaete diplosiphon
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fremyella diplosiphon NIES-3275 plasmid plasmid07 DNA, complete

Gene Summary

Adenine Count

16652 bp

Thymine Count

15754 bp

Guanine Count

11640 bp

Cytosine Count

11838 bp

Genome Length

55884 bp

Protein-coding Genes

58 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-directed dna polymeraseCA741_RS25425Not AvailableNegative6489962 - 649100541249.7
diversity-generating retroelement protein avdCA741_RS25430Not AvailableNegative6491140 - 649147813388.6
caspase, eacc1-associated typeCA741_RS25435Not AvailableNegative6491581 - 649352472485.4
hypothetical proteinCA741_RS25440Not AvailableNegative6493493 - 649392715774.3
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiCA741_RS25445Not AvailableNegative6494194 - 649598165698.0
n-acetyl-gamma-glutamyl-phosphate reductaseCA741_RS25450Not AvailablePositive6496451 - 649750938060.0
phosphopyruvate hydrataseCA741_RS25455Not AvailableNegative6497600 - 649888945695.4
pentapeptide repeat-containing proteinCA741_RS25460Not AvailableNegative6499123 - 650012737157.5
type iv pilus twitching motility protein piltCA741_RS25465Not AvailableNegative6500351 - 650156544825.1
duf58 domain-containing proteinCA741_RS25470Not AvailablePositive6501812 - 650297243221.1

Displaying genes 5211 – 5220 of 7601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.