Fremyella diplosiphon NIES-3275

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Rivulariaceae

Genus

Microchaete

Description

Fremyella diplosiphon NIES-3275 is characterized by having eight replicons. This organism is notable for its genetic diversity, as evidenced by its multiple accessions, which include NZ_AP018233.1, NZ_AP018234.1, NZ_AP018237.1, NZ_AP018240.1, NZ_AP018241.1, NZ_AP018244.1, NZ_AP018246.1, and NZ_AP018247.1. These accessions suggest a rich genomic framework that may contribute to its adaptability and resilience in various environments. The presence of multiple replicons in F. diplosiphon indicates a complex genomic architecture, which can be advantageous for metabolic versatility and survival under changing conditions. Such genetic diversity can facilitate the organism's ability to respond to environmental stressors and exploit different ecological niches. In terms of ecological significance, F. diplosiphon is known to play a role in aquatic ecosystems, particularly in freshwater environments. Its adaptability and genetic variation may influence its interactions within microbial communities, potentially impacting nutrient cycles and the overall health of the ecosystem. Through its metabolic capabilities, this cyanobacterium can contribute to primary production and the maintenance of biodiversity in its habitat. Thus, understanding the genetic characteristics of F. diplosiphon NIES-3275 can provide insights into its ecological roles and the dynamics of microbial communities in freshwater systems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyRivulariaceae
GenusMicrochaete
SpeciesMicrochaete diplosiphon
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fremyella diplosiphon NIES-3275 plasmid plasmid07 DNA, complete

Gene Summary

Adenine Count

16652 bp

Thymine Count

15754 bp

Guanine Count

11640 bp

Cytosine Count

11838 bp

Genome Length

55884 bp

Protein-coding Genes

58 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseCA741_RS09775Not AvailablePositive2444746 - 244544127108.0
glutathione s-transferase family proteinCA741_RS09780Not AvailableNegative2445789 - 244642724342.9
rna-guided endonuclease insq/tnpb family proteinCA741_RS09785Not AvailableNegative2446424 - 244754543016.4
ribbon-helix-helix protein, copg familyCA741_RS09790Not AvailablePositive2447584 - 24477305766.01
amidohydrolase family proteinCA741_RS09795Not AvailablePositive2448609 - 245008756104.7
aliphatic sulfonate abc transporter substrate-binding proteinCA741_RS09800Not AvailablePositive2450419 - 245150739553.0
thioredoxin family proteinCA741_RS09805Not AvailablePositive2451656 - 245228223225.8
pyridoxal phosphate-dependent aminotransferaseCA741_RS09810Not AvailableNegative2452427 - 245361444412.1
cadmium resistance transporterCA741_RS09815Not AvailablePositive2453973 - 245464724678.5
pentapeptide repeat-containing proteinCA741_RS09820Not AvailablePositive2454806 - 245541121077.1

Displaying genes 2081 – 2090 of 7601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.