Nostoc linckia NIES-25

Gram-negativeFilamentous

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Nostoc

Description

Nostoc linckia NIES-25 is a Gram-negative, filamentous cyanobacterium characterized by its unique morphology and genetic features. This organism possesses flagella, which may contribute to its motility and potential adaptations to various environments. The genetic makeup of Nostoc linckia NIES-25 includes four replicons, indicating a complex genomic structure that could support its metabolic versatility and ecological interactions. The organism is further cataloged with multiple accessions: NZ_AP018222.1, NZ_AP018223.1, NZ_AP018224.1, and NZ_AP018225.1, which provide a basis for genetic studies and potential biotechnological applications. In terms of ecological significance, Nostoc linckia NIES-25 likely plays a role in nitrogen fixation, a crucial process for sustaining nutrient cycles in various habitats. Its filamentous structure may facilitate colonization in diverse environments, contributing to its ability to thrive in both aquatic and terrestrial ecosystems. This adaptability, combined with its motility and genetic complexity, suggests that Nostoc linckia NIES-25 is well-suited to exploit a range of ecological niches, potentially impacting local biodiversity and nutrient dynamics.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusNostoc
SpeciesNostoc linckia
StrainNIES-25

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nostoc linckia NIES-25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nostoc linckia NIES-25 DNA, nearly complete genome.

Gene Summary

Adenine Count

1893383 bp

Thymine Count

1892783 bp

Guanine Count

1329909 bp

Cytosine Count

1331881 bp

Genome Length

6452482 bp

Protein-coding Genes

5247 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m28 family peptidaseCA726_RS30600Not AvailablePositive1034816 - 103566431637.1
hypothetical proteinCA726_RS30605Not AvailableNegative1035827 - 103612611271.6
hypothetical proteinCA726_RS30610Not AvailableNegative1036507 - 103694415549.5
endonuclease domain-containing proteinCA726_RS30615Not AvailableNegative1037471 - 103785115097.0
hypothetical proteinCA726_RS30620Not AvailablePositive1038096 - 103950853128.5
hypothetical proteinCA726_RS30625Not AvailableNegative1039841 - 104039820443.0
dmt family transporterCA726_RS30630Not AvailableNegative1040829 - 104179435500.2
dmt family transporterCA726_RS30635Not AvailableNegative1041791 - 104276235321.6
mannosyltransferase family proteinCA726_RS30640Not AvailableNegative1042921 - 104422849090.7
1-deoxy-d-xylulose-5-phosphate reductoisomeraseCA726_RS30645Not AvailablePositive1044690 - 104588643591.0

Displaying genes 6121 – 6130 of 7004 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.