Nostoc linckia NIES-25

Gram-negativeFilamentous

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Nostoc

Description

Nostoc linckia NIES-25 is a Gram-negative, filamentous cyanobacterium characterized by its unique morphology and genetic features. This organism possesses flagella, which may contribute to its motility and potential adaptations to various environments. The genetic makeup of Nostoc linckia NIES-25 includes four replicons, indicating a complex genomic structure that could support its metabolic versatility and ecological interactions. The organism is further cataloged with multiple accessions: NZ_AP018222.1, NZ_AP018223.1, NZ_AP018224.1, and NZ_AP018225.1, which provide a basis for genetic studies and potential biotechnological applications. In terms of ecological significance, Nostoc linckia NIES-25 likely plays a role in nitrogen fixation, a crucial process for sustaining nutrient cycles in various habitats. Its filamentous structure may facilitate colonization in diverse environments, contributing to its ability to thrive in both aquatic and terrestrial ecosystems. This adaptability, combined with its motility and genetic complexity, suggests that Nostoc linckia NIES-25 is well-suited to exploit a range of ecological niches, potentially impacting local biodiversity and nutrient dynamics.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusNostoc
SpeciesNostoc linckia
StrainNIES-25

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nostoc linckia NIES-25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nostoc linckia NIES-25 DNA, nearly complete genome.

Gene Summary

Adenine Count

1893383 bp

Thymine Count

1892783 bp

Guanine Count

1329909 bp

Cytosine Count

1331881 bp

Genome Length

6452482 bp

Protein-coding Genes

5247 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uma2 family endonucleaseCA726_RS11900Not AvailableNegative2802656 - 280340229359.6
smp-30/gluconolactonase/lre family proteinCA726_RS11905Not AvailablePositive2803676 - 280456033049.1
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseCA726_RS11910Not AvailableNegative2804624 - 280515119317.2
uma2 family endonucleaseCA726_RS11915Not AvailableNegative2805172 - 280573521103.4
aspartate ammonia-lyaseCA726_RS11920Not AvailablePositive2805984 - 280739950810.6
duf362 domain-containing proteinCA726_RS11925Not AvailablePositive2807703 - 280867435421.3
lamin tail domain-containing proteinCA726_RS11930Not AvailableNegative2809355 - 281068950328.3
endonuclease/exonuclease/phosphatase family proteinCA726_RS11935Not AvailableNegative2811350 - 281234536510.6
hypothetical proteinCA726_RS11940Not AvailableNegative2812486 - 281294117660.1
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhCA726_RS11945Not AvailableNegative2813151 - 281403832852.2

Displaying genes 2381 – 2390 of 7004 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.