Calothrix sp. NIES-2100

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. NIES-2100 is a cyanobacterium characterized by having two replicons, which are essential for its genetic stability and replication. The organism is cataloged under two specific accessions: NZ_AP018178.1 and NZ_AP018179.1, which provide unique identifiers for its genomic sequences in biological databases. Cyanobacteria, including Calothrix species, are known for their ability to perform photosynthesis, contributing significantly to the global carbon cycle and oxygen production. The presence of two replicons in Calothrix sp. NIES-2100 may suggest a complex genetic organization that could facilitate its adaptability to various environmental conditions. This trait is often linked to the organism's potential resilience and versatility in different ecosystems. Understanding the genomic makeup of Calothrix sp. NIES-2100 through its accessions can offer insights into its metabolic pathways and ecological roles. Cyanobacteria are crucial in nitrogen fixation and can contribute to nutrient cycling in aquatic and terrestrial ecosystems. Thus, the study of this organism could provide valuable information about its ecological functions, contributions to biodiversity, and potential applications in biotechnology, such as biofertilizers or bioremediation agents in polluted environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. NIES-2100
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. NIES-2100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. NIES-2100 DNA, nearly complete genome.

Gene Summary

Adenine Count

2902741 bp

Thymine Count

2895470 bp

Guanine Count

2052611 bp

Cytosine Count

2051206 bp

Genome Length

9909373 bp

Protein-coding Genes

7860 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cache domain-containing proteinCA734_RS02150Not AvailableNegative574688 - 577471105027.0
bmp family proteinCA734_RS02155Not AvailableNegative577481 - 57853038247.2
s-methyl-5'-thioadenosine phosphorylaseCA734_RS02160Not AvailablePositive578742 - 57961431377.8
tetratricopeptide repeat proteinCA734_RS02165Not AvailableNegative579729 - 58082641687.7
acyltransferase family proteinCA734_RS02170Not AvailablePositive581268 - 58238343855.8
caspase family proteinCA734_RS02175Not AvailableNegative582414 - 58452276543.0
sulfate adenylyltransferaseCA734_RS02180Not AvailableNegative584746 - 58592444450.1
uma2 family endonucleaseCA734_RS02185Not AvailablePositive586085 - 58673824539.3
trna 2-thiouridine(34) synthase mnmaCA734_RS02190Not AvailableNegative586874 - 58792938385.9
hypothetical proteinCA734_RS02195Not AvailablePositive588222 - 58903430468.8

Displaying genes 451 – 460 of 8016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.