Calothrix sp. NIES-2100

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. NIES-2100 is a cyanobacterium characterized by having two replicons, which are essential for its genetic stability and replication. The organism is cataloged under two specific accessions: NZ_AP018178.1 and NZ_AP018179.1, which provide unique identifiers for its genomic sequences in biological databases. Cyanobacteria, including Calothrix species, are known for their ability to perform photosynthesis, contributing significantly to the global carbon cycle and oxygen production. The presence of two replicons in Calothrix sp. NIES-2100 may suggest a complex genetic organization that could facilitate its adaptability to various environmental conditions. This trait is often linked to the organism's potential resilience and versatility in different ecosystems. Understanding the genomic makeup of Calothrix sp. NIES-2100 through its accessions can offer insights into its metabolic pathways and ecological roles. Cyanobacteria are crucial in nitrogen fixation and can contribute to nutrient cycling in aquatic and terrestrial ecosystems. Thus, the study of this organism could provide valuable information about its ecological functions, contributions to biodiversity, and potential applications in biotechnology, such as biofertilizers or bioremediation agents in polluted environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. NIES-2100
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. NIES-2100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. NIES-2100 DNA, nearly complete genome.

Gene Summary

Adenine Count

2902741 bp

Thymine Count

2895470 bp

Guanine Count

2052611 bp

Cytosine Count

2051206 bp

Genome Length

9909373 bp

Protein-coding Genes

7860 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xisi proteinCA734_RS01400Not AvailablePositive347651 - 34798912794.2
protein-arginine deiminase family proteinCA734_RS01405Not AvailableNegative348073 - 35006776280.2
hypothetical proteinCA734_RS01410Not AvailablePositive350589 - 35285984473.6
mase1 domain-containing proteinCA734_RS01415Not AvailablePositive353038 - 35506275044.8
hypothetical proteinCA734_RS01420Not AvailablePositive355228 - 3554438135.27
rna-guided endonuclease insq/tnpb family proteinCA734_RS01425Not AvailablePositive355698 - 35693047349.0
duf5009 domain-containing proteinCA734_RS01430Not AvailableNegative356942 - 35802740399.1
glycoside hydrolase family 10 proteinCA734_RS01435Not AvailablePositive358327 - 35987458720.5
bifunctional metallophosphatase/5'-nucleotidaseCA734_RS01440Not AvailablePositive360243 - 36173354667.2
serine/threonine-protein kinaseCA734_RS01445Not AvailableNegative361807 - 36381676517.9

Displaying genes 301 – 310 of 8016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.