Calothrix sp. NIES-2098

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. NIES-2098 is characterized by having a single replicon, which indicates a streamlined genomic structure. The organism is cataloged under the accession NZ_AP018172.1, providing a reference for researchers interested in its genetic makeup. Calothrix species are known for their ability to perform photosynthesis, often found in various aquatic environments. This capability allows them to contribute significantly to primary production and nutrient cycling within their ecosystems. They can thrive in diverse conditions, indicating their adaptability and ecological importance. The presence of a single replicon in Calothrix sp. NIES-2098 may reflect an evolutionary advantage in specific environments, potentially leading to a more efficient replication process and resource utilization. This trait can also influence its interactions within microbial communities, particularly in nutrient-poor habitats where competition for resources is intense. In summary, Calothrix sp. NIES-2098, with its single replicon and documented genetic information, illustrates the significance of cyanobacteria in aquatic ecosystems. Their photosynthetic abilities and adaptability underscore their role in supporting biodiversity and maintaining ecological balance in their habitats.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. NIES-2098
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. NIES-2098
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. NIES-2098 DNA, complete genome.

Gene Summary

Adenine Count

2541431 bp

Thymine Count

2548194 bp

Guanine Count

1781965 bp

Cytosine Count

1784470 bp

Genome Length

8656060 bp

Protein-coding Genes

7059 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidaseCA733_RS32195Not AvailableNegative7766053 - 776659220755.8
l,d-transpeptidaseCA733_RS32200Not AvailableNegative7767366 - 776787819065.9
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseCA733_RS32205Not AvailableNegative7767903 - 776856523699.0
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhCA733_RS32210Not AvailablePositive7768742 - 776963833326.7
atp-binding proteinCA733_RS32215Not AvailableNegative7769783 - 777130055912.5
abc transporter atp-binding proteinCA733_RS32220Not AvailableNegative7772666 - 777455270113.0
single-stranded dna-binding proteinCA733_RS32225Not AvailableNegative7774790 - 777536220645.0
fad-dependent oxidoreductaseCA733_RS32230Not AvailableNegative7775656 - 777691246792.7
abc transporter atp-binding proteinCA733_RS32235Not AvailablePositive7777109 - 777843749383.6
hypothetical proteinCA733_RS32240Not AvailableNegative7778536 - 777945634888.4

Displaying genes 6441 – 6450 of 7159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.