Calothrix sp. NIES-2098

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. NIES-2098 is characterized by having a single replicon, which indicates a streamlined genomic structure. The organism is cataloged under the accession NZ_AP018172.1, providing a reference for researchers interested in its genetic makeup. Calothrix species are known for their ability to perform photosynthesis, often found in various aquatic environments. This capability allows them to contribute significantly to primary production and nutrient cycling within their ecosystems. They can thrive in diverse conditions, indicating their adaptability and ecological importance. The presence of a single replicon in Calothrix sp. NIES-2098 may reflect an evolutionary advantage in specific environments, potentially leading to a more efficient replication process and resource utilization. This trait can also influence its interactions within microbial communities, particularly in nutrient-poor habitats where competition for resources is intense. In summary, Calothrix sp. NIES-2098, with its single replicon and documented genetic information, illustrates the significance of cyanobacteria in aquatic ecosystems. Their photosynthetic abilities and adaptability underscore their role in supporting biodiversity and maintaining ecological balance in their habitats.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. NIES-2098
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. NIES-2098
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. NIES-2098 DNA, complete genome.

Gene Summary

Adenine Count

2541431 bp

Thymine Count

2548194 bp

Guanine Count

1781965 bp

Cytosine Count

1784470 bp

Genome Length

8656060 bp

Protein-coding Genes

7059 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
photosynthesis system ii assembly factor ycf48CA733_RS24895Not AvailablePositive6020872 - 602189437289.8
cytochrome b559 subunit alphaCA733_RS24900Not AvailablePositive6022014 - 60222629358.19
cytochrome b559 subunit betaCA733_RS24905Not AvailablePositive6022272 - 60224095022.22
photosystem ii reaction center protein lCA733_RS24910Not AvailablePositive6022419 - 60225384532.55
photosystem ii reaction center protein jCA733_RS24915Not AvailablePositive6022610 - 60227293915.9
photosystem i reaction center subunit viiiCA733_RS24920Not AvailableNegative6022880 - 60230205104.34
hypothetical proteinCA733_RS24925Not AvailableNegative6023132 - 6025951103238.0
hypothetical proteinCA733_RS24930Not AvailableNegative6026324 - 60265699421.26
hypothetical proteinCA733_RS24935Not AvailableNegative6026573 - 602747530924.9
rna polymerase sigma factor sigfCA733_RS24940Not AvailableNegative6027638 - 602841429795.7

Displaying genes 4981 – 4990 of 7159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.