Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shigaense |
| Strain | strain JCM 32072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857390 bp
Thymine Count
855783 bp
Guanine Count
1764299 bp
Cytosine Count
1755188 bp
Genome Length
5232660 bp
Protein-coding Genes
4902 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carotenoid oxygenase family protein | MSG_RS04195 | Not Available | Positive | 872209 - 873720 | 55032.9 |
| abc transporter atp-binding protein | MSG_RS04200 | Not Available | Positive | 873901 - 874911 | 36713.5 |
| dna-directed rna polymerase subunit beta | MSG_RS04205 | Not Available | Positive | 875376 - 878867 | 128316.0 |
| dna-directed rna polymerase subunit beta' | MSG_RS04210 | Not Available | Positive | 878903 - 882853 | 146684.0 |
| taud/tfda family dioxygenase | MSG_RS04215 | Not Available | Negative | 882950 - 884410 | 51276.1 |
| saccharopine dehydrogenase family protein | MSG_RS04220 | Not Available | Negative | 884540 - 885757 | 44226.7 |
| gamma-aminobutyraldehyde dehydrogenase | MSG_RS04225 | Not Available | Negative | 885836 - 887323 | 51896.3 |
| lrp/asnc family transcriptional regulator | MSG_RS04230 | Not Available | Positive | 887444 - 887968 | 19207.1 |
| aspartate aminotransferase family protein | MSG_RS04235 | Not Available | Positive | 887965 - 889320 | 48995.0 |
| deoxyribonuclease iv | MSG_RS04240 | Not Available | Positive | 889422 - 890180 | 26826.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


