Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shigaense |
| Strain | strain JCM 32072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857390 bp
Thymine Count
855783 bp
Guanine Count
1764299 bp
Cytosine Count
1755188 bp
Genome Length
5232660 bp
Protein-coding Genes
4902 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2752 domain-containing protein | MSG_RS03050 | Not Available | Positive | 648492 - 648917 | 15321.1 |
| m28 family metallopeptidase | MSG_RS03055 | Not Available | Positive | 648969 - 650480 | 51913.9 |
| m28 family peptidase | MSG_RS03060 | Not Available | Positive | 650477 - 651946 | 50478.2 |
| peptidase | MSG_RS03065 | Not Available | Positive | 652052 - 653524 | 52245.0 |
| duf4190 domain-containing protein | MSG_RS03070 | Not Available | Positive | 653603 - 654049 | 14464.8 |
| llm class f420-dependent oxidoreductase | MSG_RS03075 | Not Available | Negative | 654061 - 654933 | 31875.1 |
| marr family winged helix-turn-helix transcriptional regulator | MSG_RS03080 | Not Available | Negative | 654952 - 655386 | 16089.2 |
| alpha/beta family hydrolase | MSG_RS03085 | Not Available | Negative | 655465 - 656091 | 22072.4 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | MSG_RS03090 | Not Available | Negative | 656091 - 656918 | 28639.4 |
| phosphomethylpyrimidine synthase thic | MSG_RS03095 | Not Available | Negative | 656929 - 658575 | 59933.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


