Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shigaense |
| Strain | strain JCM 32072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857390 bp
Thymine Count
855783 bp
Guanine Count
1764299 bp
Cytosine Count
1755188 bp
Genome Length
5232660 bp
Protein-coding Genes
4902 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | MSG_RS00170 | Not Available | Negative | 33996 - 34982 | 35284.6 |
| acyl-coa dehydrogenase family protein | MSG_RS00175 | Not Available | Negative | 35042 - 36424 | 49831.8 |
| whib family transcriptional regulator | MSG_RS00180 | Not Available | Negative | 36519 - 36935 | 15236.1 |
| helix-turn-helix domain-containing protein | MSG_RS00185 | Not Available | Positive | 37080 - 37868 | 27546.5 |
| c40 family peptidase | MSG_RS00190 | Not Available | Positive | 37865 - 38689 | 29607.6 |
| duf4226 domain-containing protein | MSG_RS00195 | Not Available | Positive | 38740 - 39102 | 12827.1 |
| duf4226 domain-containing protein | MSG_RS00200 | Not Available | Positive | 39237 - 40655 | 47347.7 |
| esx-1 secretion-associated protein | MSG_RS00205 | Not Available | Positive | 40710 - 41027 | 11566.4 |
| duf2694 family protein | MSG_RS00210 | Not Available | Positive | 41024 - 41326 | 10714.8 |
| hypothetical protein | MSG_RS25045 | Not Available | Negative | 41366 - 41509 | 5187.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


