Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shigaense |
| Strain | strain JCM 32072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857390 bp
Thymine Count
855783 bp
Guanine Count
1764299 bp
Cytosine Count
1755188 bp
Genome Length
5232660 bp
Protein-coding Genes
4902 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | MSG_RS01605 | Not Available | Negative | 335285 - 336103 | 29002.4 |
| taud/tfda family dioxygenase | MSG_RS26065 | Not Available | Negative | 336174 - 336260 | 3066.53 |
| acyl-coa thioesterase | MSG_RS01610 | Not Available | Positive | 336382 - 337263 | 31856.7 |
| llm class f420-dependent oxidoreductase | MSG_RS01615 | Not Available | Positive | 337269 - 338189 | 32842.6 |
| taud/tfda family dioxygenase | MSG_RS01620 | Not Available | Positive | 338207 - 339372 | 41500.5 |
| zip family metal transporter | MSG_RS01625 | Not Available | Positive | 339421 - 340149 | 24610.3 |
| fad-dependent monooxygenase | MSG_RS01630 | Not Available | Negative | 340219 - 341922 | 63449.8 |
| duf427 domain-containing protein | MSG_RS01635 | Not Available | Negative | 342295 - 342960 | 24530.1 |
| hypothetical protein | MSG_RS01640 | Not Available | Positive | 343020 - 343298 | 9477.39 |
| caib/baif coa transferase family protein | MSG_RS01645 | Not Available | Positive | 343309 - 344478 | 41702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


