Mycobacterium shigaense strain JCM 32072

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shigaense strain JCM 32072 is characterized by the presence of flagella, which distinguishes it from many other mycobacterial species that typically lack flagella. This trait may play a role in its motility, potentially influencing its ecological interactions and environmental adaptability. In terms of genomic characteristics, Mycobacterium shigaense strain JCM 32072 possesses a single replicon, indicating a simplified genomic structure compared to species with multiple replicons. This can have implications for its genetic stability and replication efficiency. The strain is cataloged under the accession number NZ_AP018164.1, which provides a reference for genomic data and supports its identification in scientific research. From a biological or ecological perspective, the presence of flagella in Mycobacterium shigaense strain JCM 32072 may enhance its ability to navigate through various environments, potentially impacting its survival and interaction with other microorganisms. This motility could facilitate colonization of specific niches or influence its pathogenicity, although further research would be necessary to elucidate these dynamics fully.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shigaense
Strainstrain JCM 32072

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shigaense strain JCM 32072 chromosome, complete

Gene Summary

Adenine Count

857390 bp

Thymine Count

855783 bp

Guanine Count

1764299 bp

Cytosine Count

1755188 bp

Genome Length

5232660 bp

Protein-coding Genes

4902 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smp-30/gluconolactonase/lre family proteinMSG_RS01605Not AvailableNegative335285 - 33610329002.4
taud/tfda family dioxygenaseMSG_RS26065Not AvailableNegative336174 - 3362603066.53
acyl-coa thioesteraseMSG_RS01610Not AvailablePositive336382 - 33726331856.7
llm class f420-dependent oxidoreductaseMSG_RS01615Not AvailablePositive337269 - 33818932842.6
taud/tfda family dioxygenaseMSG_RS01620Not AvailablePositive338207 - 33937241500.5
zip family metal transporterMSG_RS01625Not AvailablePositive339421 - 34014924610.3
fad-dependent monooxygenaseMSG_RS01630Not AvailableNegative340219 - 34192263449.8
duf427 domain-containing proteinMSG_RS01635Not AvailableNegative342295 - 34296024530.1
hypothetical proteinMSG_RS01640Not AvailablePositive343020 - 3432989477.39
caib/baif coa transferase family proteinMSG_RS01645Not AvailablePositive343309 - 34447841702.2

Displaying genes 341 – 350 of 4966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.