Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shigaense |
| Strain | strain JCM 32072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857390 bp
Thymine Count
855783 bp
Guanine Count
1764299 bp
Cytosine Count
1755188 bp
Genome Length
5232660 bp
Protein-coding Genes
4902 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | MSG_RS00560 | Not Available | Positive | 113731 - 114288 | 19387.6 |
| nuclear transport factor 2 family protein | MSG_RS00565 | Not Available | Positive | 114293 - 114709 | 15131.1 |
| tigr03854 family llm class f420-dependent oxidoreductase | MSG_RS00570 | Not Available | Positive | 114826 - 115677 | 29952.1 |
| taud/tfda family dioxygenase | MSG_RS00575 | Not Available | Negative | 115674 - 116572 | 31924.4 |
| hemerythrin domain-containing protein | MSG_RS00580 | Not Available | Negative | 116642 - 117217 | 21662.4 |
| mfs transporter | MSG_RS00585 | Not Available | Negative | 117283 - 118671 | 47255.0 |
| nudix hydrolase | MSG_RS00590 | Not Available | Positive | 118797 - 119516 | 26004.1 |
| llm class flavin-dependent oxidoreductase | MSG_RS00595 | Not Available | Negative | 119517 - 120587 | 39489.6 |
| catalase family peroxidase | MSG_RS00600 | Not Available | Negative | 120643 - 121581 | 33909.9 |
| taud/tfda dioxygenase family protein | MSG_RS00605 | Not Available | Positive | 121832 - 122620 | 29119.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


