Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shigaense |
| Strain | strain JCM 32072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857390 bp
Thymine Count
855783 bp
Guanine Count
1764299 bp
Cytosine Count
1755188 bp
Genome Length
5232660 bp
Protein-coding Genes
4902 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | MSG_RS00415 | Not Available | Negative | 85963 - 86259 | 10652.5 |
| type ii toxin-antitoxin system rele/pare family toxin | MSG_RS00420 | Not Available | Negative | 86264 - 86605 | 13444.0 |
| dde-type integrase/transposase/recombinase | MSG_RS00425 | Not Available | Positive | 86776 - 87186 | 15760.0 |
| taud/tfda family dioxygenase | MSG_RS00435 | Not Available | Positive | 87473 - 88536 | 36997.2 |
| taud/tfda family dioxygenase | MSG_RS00440 | Not Available | Positive | 88518 - 89018 | 18089.7 |
| taud/tfda family dioxygenase | MSG_RS25390 | Not Available | Positive | 89222 - 89892 | 24220.0 |
| taud/tfda family dioxygenase | MSG_RS26050 | Not Available | Positive | 89981 - 90211 | 8086.71 |
| taud/tfda family dioxygenase | MSG_RS26055 | Not Available | Positive | 90348 - 90567 | 8141.61 |
| glycoside hydrolase family 6 protein | MSG_RS00460 | Not Available | Positive | 91189 - 92181 | 33592.3 |
| ggdef domain-containing protein | MSG_RS00465 | Not Available | Positive | 92333 - 93403 | 37992.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


