Mycobacterium shigaense strain JCM 32072

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shigaense strain JCM 32072 is characterized by the presence of flagella, which distinguishes it from many other mycobacterial species that typically lack flagella. This trait may play a role in its motility, potentially influencing its ecological interactions and environmental adaptability. In terms of genomic characteristics, Mycobacterium shigaense strain JCM 32072 possesses a single replicon, indicating a simplified genomic structure compared to species with multiple replicons. This can have implications for its genetic stability and replication efficiency. The strain is cataloged under the accession number NZ_AP018164.1, which provides a reference for genomic data and supports its identification in scientific research. From a biological or ecological perspective, the presence of flagella in Mycobacterium shigaense strain JCM 32072 may enhance its ability to navigate through various environments, potentially impacting its survival and interaction with other microorganisms. This motility could facilitate colonization of specific niches or influence its pathogenicity, although further research would be necessary to elucidate these dynamics fully.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shigaense
Strainstrain JCM 32072

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shigaense strain JCM 32072 chromosome, complete

Gene Summary

Adenine Count

857390 bp

Thymine Count

855783 bp

Guanine Count

1764299 bp

Cytosine Count

1755188 bp

Genome Length

5232660 bp

Protein-coding Genes

4902 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinMSG_RS00415Not AvailableNegative85963 - 8625910652.5
type ii toxin-antitoxin system rele/pare family toxinMSG_RS00420Not AvailableNegative86264 - 8660513444.0
dde-type integrase/transposase/recombinaseMSG_RS00425Not AvailablePositive86776 - 8718615760.0
taud/tfda family dioxygenaseMSG_RS00435Not AvailablePositive87473 - 8853636997.2
taud/tfda family dioxygenaseMSG_RS00440Not AvailablePositive88518 - 8901818089.7
taud/tfda family dioxygenaseMSG_RS25390Not AvailablePositive89222 - 8989224220.0
taud/tfda family dioxygenaseMSG_RS26050Not AvailablePositive89981 - 902118086.71
taud/tfda family dioxygenaseMSG_RS26055Not AvailablePositive90348 - 905678141.61
glycoside hydrolase family 6 proteinMSG_RS00460Not AvailablePositive91189 - 9218133592.3
ggdef domain-containing proteinMSG_RS00465Not AvailablePositive92333 - 9340337992.1

Displaying genes 101 – 110 of 4966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.