Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trae/trak family type iv conjugative transfer system protein | SCLO_RS01115 | Not Available | Negative | 209428 - 210066 | 23678.4 |
| type iv conjugative transfer system protein tral | SCLO_RS01120 | Not Available | Negative | 210076 - 210342 | 10215.8 |
| hypothetical protein | SCLO_RS01125 | Not Available | Negative | 210477 - 210794 | 10681.3 |
| dsbc family protein | SCLO_RS01130 | Not Available | Negative | 210952 - 211722 | 26973.2 |
| hypothetical protein | SCLO_RS01135 | Not Available | Negative | 211709 - 212026 | 10929.1 |
| helix-turn-helix domain-containing protein | SCLO_RS01140 | Not Available | Positive | 212475 - 212891 | 15564.8 |
| nucleoside-diphosphate kinase | SCLO_RS01145 | Not Available | Negative | 213409 - 213588 | 6571.76 |
| yggs family pyridoxal phosphate-dependent enzyme | SCLO_RS01150 | Not Available | Negative | 213578 - 214402 | 29455.3 |
| marr family winged helix-turn-helix transcriptional regulator | SCLO_RS01155 | Not Available | Positive | 214492 - 215118 | 22192.4 |
| thioredoxin | SCLO_RS01160 | Not Available | Positive | 215198 - 215443 | 8217.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

