Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | SCLO_RS00275 | Not Available | Positive | 56641 - 57810 | 42263.7 |
| rid family hydrolase | SCLO_RS00280 | Not Available | Positive | 57840 - 58223 | 13734.6 |
| hypothetical protein | SCLO_RS00285 | Not Available | Negative | 58277 - 58414 | 5124.16 |
| hypothetical protein | SCLO_RS23185 | Not Available | Negative | 58764 - 59009 | 8553.45 |
| phage integrase sam-like domain-containing protein | SCLO_RS23190 | Not Available | Negative | 59018 - 59995 | 36868.7 |
| nucleoside-diphosphate kinase | SCLO_RS00295 | Not Available | Positive | 59985 - 60272 | 11255.5 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | SCLO_RS00300 | Not Available | Positive | 60642 - 60887 | 9016.93 |
| type ii toxin-antitoxin system vapc family toxin | SCLO_RS00305 | Not Available | Positive | 60884 - 61270 | 14094.9 |
| type ii toxin-antitoxin system pard family antitoxin | SCLO_RS00310 | Not Available | Negative | 61351 - 61602 | 9417.21 |
| is630 family transposase | SCLO_RS00315 | Not Available | Negative | 61667 - 62737 | 39862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

