Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | SCLO_RS21575 | Not Available | Positive | 37214 - 37978 | 29722.9 |
| serine/threonine protein phosphatase | SCLO_RS21580 | Not Available | Negative | 38167 - 39159 | 37044.9 |
| is6 family transposase | SCLO_RS21585 | Not Available | Positive | 39455 - 40219 | 29722.9 |
| atp-dependent nuclease | SCLO_RS21590 | Not Available | Positive | 40265 - 42709 | 89846.0 |
| xre family transcriptional regulator | SCLO_RS21595 | Not Available | Negative | 42706 - 42972 | 9458.53 |
| type ii toxin-antitoxin system rele/pare family toxin | SCLO_RS21600 | Not Available | Negative | 43020 - 43313 | 10845.0 |
| copg family ribbon-helix-helix protein | SCLO_RS21605 | Not Available | Negative | 43301 - 43579 | 10660.6 |
| tn3 family transposase | SCLO_RS21610 | Not Available | Negative | 43744 - 46635 | 107888.0 |
| recombinase family protein | SCLO_RS21615 | Not Available | Positive | 46761 - 47381 | 22435.1 |
| gnat family n-acetyltransferase | SCLO_RS21620 | Not Available | Positive | 47378 - 47908 | 19476.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

