Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system toxin component, pin family | SCLO_RS20630 | Not Available | Positive | 27574 - 28008 | 16234.8 |
| duf6118 family protein | SCLO_RS20635 | Not Available | Positive | 28005 - 28781 | 28465.1 |
| is6-like element is6100 family transposase | SCLO_RS20640 | Not Available | Positive | 28747 - 29511 | 29785.1 |
| hypothetical protein | SCLO_RS20650 | Not Available | Positive | 29567 - 30049 | 17476.5 |
| hypothetical protein | SCLO_RS20655 | Not Available | Positive | 30050 - 31423 | 50456.0 |
| p-type conjugative transfer protein trbl | SCLO_RS20665 | Not Available | Positive | 31703 - 32947 | 41406.9 |
| conjugal transfer protein trbf | SCLO_RS20670 | Not Available | Positive | 33008 - 33685 | 25216.8 |
| p-type conjugative transfer protein trbg | SCLO_RS20675 | Not Available | Positive | 33796 - 34695 | 32416.6 |
| hypothetical protein | SCLO_RS20680 | Not Available | Positive | 34695 - 35141 | 15480.8 |
| trbi/virb10 family protein | SCLO_RS20685 | Not Available | Positive | 35153 - 36448 | 45294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

