Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein repa | SCLO_RS20470 | Not Available | Negative | 373641 - 374945 | 48487.8 |
| conjugal transfer protein trad | SCLO_RS22215 | Not Available | Positive | 3 - 191 | 6900.26 |
| hypothetical protein | SCLO_RS22220 | Not Available | Positive | 188 - 469 | 10115.0 |
| hepn domain-containing protein | SCLO_RS22225 | Not Available | Positive | 466 - 1401 | 35287.1 |
| antitoxin vbha family protein | SCLO_RS22230 | Not Available | Positive | 1394 - 1666 | 9703.25 |
| type iv secretory system conjugative dna transfer family protein | SCLO_RS22235 | Not Available | Positive | 1714 - 3405 | 61094.4 |
| tn3 family transposase | SCLO_RS22240 | Not Available | Negative | 3516 - 6407 | 107888.0 |
| recombinase family protein | SCLO_RS22245 | Not Available | Positive | 6533 - 7135 | 21907.4 |
| recombinase family protein | SCLO_RS22250 | Not Available | Negative | 7210 - 8076 | 32170.6 |
| tn3 family transposase | SCLO_RS22255 | Not Available | Negative | 8219 - 11128 | 109016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

