Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is630 family transposase | SCLO_RS15730 | Not Available | Negative | 3208828 - 3209898 | 39862.6 |
| ump kinase | SCLO_RS15735 | Not Available | Positive | 3210036 - 3210761 | 25712.1 |
| ribosome recycling factor | SCLO_RS15740 | Not Available | Positive | 3210768 - 3211325 | 20306.3 |
| polyprenyl diphosphate synthase | SCLO_RS15745 | Not Available | Positive | 3211372 - 3212112 | 27150.7 |
| phosphatidate cytidylyltransferase | SCLO_RS15750 | Not Available | Positive | 3212117 - 3212893 | 26744.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SCLO_RS15755 | Not Available | Positive | 3212893 - 3214050 | 40758.4 |
| rip metalloprotease rsep | SCLO_RS15760 | Not Available | Positive | 3214047 - 3215180 | 40524.5 |
| outer membrane protein assembly factor bama | SCLO_RS15765 | Not Available | Positive | 3215271 - 3217925 | 98480.5 |
| omph family outer membrane protein | SCLO_RS15770 | Not Available | Positive | 3217925 - 3218587 | 22640.9 |
| 3-hydroxyacyl-acp dehydratase fabz | SCLO_RS15775 | Not Available | Positive | 3218594 - 3219076 | 16951.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

