Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | SCLO_RS19505 | Not Available | Positive | 176256 - 177227 | 33992.4 |
| hypothetical protein | SCLO_RS19510 | Not Available | Negative | 177260 - 177766 | 18970.2 |
| hypothetical protein | SCLO_RS19515 | Not Available | Negative | 177891 - 178361 | 17314.9 |
| trbc/virb2 family protein | SCLO_RS19520 | Not Available | Positive | 178726 - 179046 | 10680.3 |
| type iv conjugative transfer system protein tral | SCLO_RS19525 | Not Available | Positive | 179108 - 179398 | 10593.0 |
| type iv conjugative transfer system protein trae | SCLO_RS19530 | Not Available | Positive | 179400 - 179966 | 21267.8 |
| type-f conjugative transfer system secretin trak | SCLO_RS19535 | Not Available | Positive | 179963 - 180766 | 28417.0 |
| trbi/virb10 family protein | SCLO_RS19540 | Not Available | Positive | 180770 - 182098 | 46414.0 |
| dsbc family protein | SCLO_RS19545 | Not Available | Positive | 182085 - 182960 | 31081.4 |
| trav family lipoprotein | SCLO_RS19550 | Not Available | Positive | 182957 - 183988 | 34555.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

