Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | SCLO_RS05880 | Not Available | Negative | 1201663 - 1204176 | 91804.8 |
| fecr family protein | SCLO_RS05885 | Not Available | Negative | 1204316 - 1205233 | 33059.5 |
| rna polymerase sigma factor | SCLO_RS05890 | Not Available | Negative | 1205357 - 1205881 | 19998.8 |
| transposase | SCLO_RS05900 | Not Available | Positive | 1206120 - 1206539 | 15081.3 |
| is66 family insertion sequence element accessory protein tnpb | SCLO_RS05905 | Not Available | Positive | 1206536 - 1206907 | 13803.7 |
| is66 family transposase | SCLO_RS05910 | Not Available | Positive | 1207202 - 1208695 | 55747.6 |
| ycei family protein | SCLO_RS05915 | Not Available | Negative | 1209222 - 1209803 | 20502.4 |
| cytochrome b | SCLO_RS05920 | Not Available | Negative | 1209808 - 1210398 | 21696.2 |
| ycei family protein | SCLO_RS23785 | Not Available | Negative | 1210502 - 1210774 | 9516.48 |
| helix-turn-helix domain-containing protein | SCLO_RS05930 | Not Available | Positive | 1210769 - 1211746 | 36026.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

