Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium cloacae |
| Strain | strain JCM 10874 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc1 kinase family protein | SCLO_RS05290 | Not Available | Positive | 1079957 - 1081465 | 54211.9 |
| type i dna topoisomerase | SCLO_RS05295 | Not Available | Negative | 1081502 - 1084057 | 93448.2 |
| dna-processing protein dpra | SCLO_RS05300 | Not Available | Negative | 1084184 - 1085266 | 37422.4 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | SCLO_RS05305 | Not Available | Negative | 1085263 - 1085862 | 20254.6 |
| glutamate racemase | SCLO_RS05310 | Not Available | Positive | 1085992 - 1086795 | 27801.9 |
| 5-aminolevulinate synthase | SCLO_RS05315 | Not Available | Positive | 1086925 - 1088145 | 44458.4 |
| class i sam-dependent methyltransferase | SCLO_RS05320 | Not Available | Negative | 1088194 - 1088817 | 22692.4 |
| duf3419 family protein | SCLO_RS05325 | Not Available | Negative | 1088838 - 1090061 | 45570.2 |
| ligase-associated dna damage response exonuclease | SCLO_RS05330 | Not Available | Positive | 1090195 - 1091187 | 36603.8 |
| cisplatin damage response atp-dependent dna ligase | SCLO_RS05335 | Not Available | Positive | 1091184 - 1092767 | 58785.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

