Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain ATCC 43504 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain PMSS1 chromosome, complete genome.
Gene Summary
Adenine Count
488615 bp
Thymine Count
488780 bp
Guanine Count
310830 bp
Cytosine Count
314868 bp
Genome Length
1603093 bp
Protein-coding Genes
1494 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | HPPMSS1_RS01290 | Not Available | Positive | 259023 - 259610 | 21869.4 |
| shikimate dehydrogenase | HPPMSS1_RS01295 | Not Available | Positive | 259618 - 260409 | 28977.2 |
| ribonuclease catalytic domain-containing protein | HPPMSS1_RS01300 | Not Available | Positive | 260409 - 262343 | 74142.5 |
| dna polymerase iii subunit delta | HPPMSS1_RS01305 | Not Available | Positive | 262333 - 263355 | 39742.1 |
| 30s ribosomal protein s6 | HPPMSS1_RS01310 | Not Available | Positive | 263508 - 263936 | 16984.3 |
| single-stranded dna-binding protein | HPPMSS1_RS01315 | Not Available | Positive | 263946 - 264491 | 20322.7 |
| 30s ribosomal protein s18 | HPPMSS1_RS01320 | Not Available | Positive | 264514 - 264771 | 10448.9 |
| type i restriction-modification system subunit m | HPPMSS1_RS01325 | Not Available | Positive | 265339 - 267457 | 78215.5 |
| ydch family protein | HPPMSS1_RS01330 | Not Available | Negative | 268029 - 268259 | 9090.72 |
| alanine--trna ligase | HPPMSS1_RS01335 | Not Available | Positive | 268378 - 270921 | 94824.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |







