Helicobacter pylori strain ATCC 43504

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ATCC 43504 is a Gram-negative bacterium that exhibits a spirilla shape and is characterized as microaerophilic, thriving optimally at 37°C within a mesophilic temperature range. This strain is notable for its presence in various hosts, including Homo sapiens, Gallus gallus (chickens), Aves (birds), Primates, Mammalia, Amoeba, Rodentia, and Cricetinae. It has a free-living biotic relationship and is equipped with flagella, though it does not exhibit mobility. H. pylori strain ATCC 43504 bears significant health implications, being associated with a range of gastrointestinal disorders. These include chronic gastric inflammation, peptic ulcer disease, and various forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. The organism is also linked to conditions like GERD, functional dyspepsia, and atrophic gastritis, underscoring its pathogenicity in humans. Additionally, the bacterium contains three replicons and has a dual membrane structure. The presence of H. pylori in the human gastric mucosa can lead to asymptomatic mucosal inflammatory responses, but it is primarily recognized for its role in eliciting severe gastric conditions and cancers. This highlights the ecological significance of H. pylori in the human gut, where it not only adapts to the host environment but also plays a crucial role in the pathogenesis of gastrointestinal diseases. Such insights emphasize the importance of understanding H. pylori's biology and its impact on human health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain ATCC 43504

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain ATCC 43504
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PMSS1 chromosome, complete genome.

Gene Summary

Adenine Count

488615 bp

Thymine Count

488780 bp

Guanine Count

310830 bp

Cytosine Count

314868 bp

Genome Length

1603093 bp

Protein-coding Genes

1494 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catalaseHPATCC43504_RS05300Not AvailableNegative1100375 - 110189258618.1
tonb-dependent receptorHPATCC43504_RS05305Not AvailablePositive1102213 - 110458888367.9
crossover junction endodeoxyribonuclease ruvcHPATCC43504_RS05310Not AvailableNegative1104589 - 110506217478.5
nyn domain-containing proteinHPATCC43504_RS05315Not AvailablePositive1105194 - 110591928216.7
plasmid mobilization relaxosome protein mobcHPATCC43504_RS08400Not AvailableNegative1107004 - 110738613787.9
holliday junction branch migration protein ruvaHPATCC43504_RS05325Not AvailableNegative1107453 - 110800420166.0
fapa family proteinHPATCC43504_RS05330Not AvailableNegative1108030 - 110987470626.5
murein biosynthesis integral membrane protein murjHPATCC43504_RS05335Not AvailablePositive1109967 - 111142754348.7
cysteine--trna ligaseHPATCC43504_RS05340Not AvailablePositive1111428 - 111282553126.7
autotransporter vacuolating cytotoxin vacaHPATCC43504_RS05345Not AvailablePositive1113050 - 1116922139559.0

Displaying genes 2621 – 2630 of 3179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total