Pleomorphomonas sp. SM30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Pleomorphomonadaceae

Genus

Pleomorphomonas

Description

Pleomorphomonas sp. SM30 is characterized by possessing three replicons, which suggests a complex genomic structure. The organism is cataloged under the accession numbers NZ_AP017626.1, NZ_AP017627.1, and NZ_AP017628.1, indicating that its genetic material is well-documented and accessible for further study. The presence of multiple replicons may provide insights into the organism's adaptability and potential for genetic variation. This trait is often associated with bacteria that inhabit diverse or challenging environments, as it can facilitate the acquisition and maintenance of beneficial genes. Such genetic flexibility could enable Pleomorphomonas sp. SM30 to respond effectively to environmental pressures, such as changes in nutrient availability or stress conditions. Understanding the genomic architecture of Pleomorphomonas sp. SM30 may also shed light on its ecological role. The ability to harbor multiple replicons can be advantageous for survival in varied ecosystems, potentially allowing the organism to occupy niches that require rapid adaptation. This adaptability could contribute to the organism's interactions within its microbial community, influencing nutrient cycling and energy flow in its habitat. In summary, the three replicons of Pleomorphomonas sp. SM30, along with its documented genetic information, highlight its potential versatility and ecological significance in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPleomorphomonadaceae
GenusPleomorphomonas
SpeciesPleomorphomonas sp. SM30
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pleomorphomonas sp. SM30 plasmid pSM30-1, complete sequence.

Gene Summary

Adenine Count

19465 bp

Thymine Count

19356 bp

Guanine Count

50813 bp

Cytosine Count

51692 bp

Genome Length

141326 bp

Protein-coding Genes

114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorOHA_RS17445Not AvailableNegative3829081 - 382955717647.1
trap transporter small permease subunitOHA_RS17450Not AvailablePositive3829961 - 383050319730.6
trap transporter large permease subunitOHA_RS17455Not AvailablePositive3830529 - 383218157262.5
trap transporter substrate-binding proteinOHA_RS17460Not AvailableNegative3832276 - 383337940146.5
trap transporter substrate-binding proteinOHA_RS17465Not AvailableNegative3833686 - 383479240204.9
gamma-glutamyl-gamma-aminobutyrate hydrolase family proteinOHA_RS17470Not AvailablePositive3835096 - 383584526413.6
nickel/cobalt transporterOHA_RS17475Not AvailableNegative3835862 - 383701938352.1
duf1007 family proteinOHA_RS17480Not AvailableNegative3837010 - 383766923654.0
lysr family transcriptional regulatorOHA_RS17485Not AvailableNegative3837767 - 383867833726.5
type iii plp-dependent enzymeOHA_RS17490Not AvailablePositive3839392 - 384052240604.7

Displaying genes 3681 – 3690 of 4595 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.