Pleomorphomonas sp. SM30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Pleomorphomonadaceae

Genus

Pleomorphomonas

Description

Pleomorphomonas sp. SM30 is characterized by possessing three replicons, which suggests a complex genomic structure. The organism is cataloged under the accession numbers NZ_AP017626.1, NZ_AP017627.1, and NZ_AP017628.1, indicating that its genetic material is well-documented and accessible for further study. The presence of multiple replicons may provide insights into the organism's adaptability and potential for genetic variation. This trait is often associated with bacteria that inhabit diverse or challenging environments, as it can facilitate the acquisition and maintenance of beneficial genes. Such genetic flexibility could enable Pleomorphomonas sp. SM30 to respond effectively to environmental pressures, such as changes in nutrient availability or stress conditions. Understanding the genomic architecture of Pleomorphomonas sp. SM30 may also shed light on its ecological role. The ability to harbor multiple replicons can be advantageous for survival in varied ecosystems, potentially allowing the organism to occupy niches that require rapid adaptation. This adaptability could contribute to the organism's interactions within its microbial community, influencing nutrient cycling and energy flow in its habitat. In summary, the three replicons of Pleomorphomonas sp. SM30, along with its documented genetic information, highlight its potential versatility and ecological significance in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPleomorphomonadaceae
GenusPleomorphomonas
SpeciesPleomorphomonas sp. SM30
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pleomorphomonas sp. SM30 plasmid pSM30-1, complete sequence.

Gene Summary

Adenine Count

19465 bp

Thymine Count

19356 bp

Guanine Count

50813 bp

Cytosine Count

51692 bp

Genome Length

141326 bp

Protein-coding Genes

114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinOHA_RS11745Not AvailableNegative2550937 - 255131413753.1
Trna-glyNot AvailableNot AvailablePositive2551487 - 2551560Not Available
duf2249 domain-containing proteinOHA_RS11755Not AvailablePositive2551951 - 25522149565.54
nad(p)/fad-dependent oxidoreductaseOHA_RS11760Not AvailablePositive2552529 - 255365640877.5
2'-deoxycytidine 5'-triphosphate deaminaseOHA_RS11765Not AvailableNegative2553679 - 255478839984.9
ligase-associated dna damage response exonucleaseOHA_RS11770Not AvailablePositive2554922 - 255600738353.6
cisplatin damage response atp-dependent dna ligaseOHA_RS11775Not AvailablePositive2556004 - 255764459982.8
ceramidase domain-containing proteinOHA_RS11780Not AvailableNegative2557645 - 255831323205.7
duf2189 domain-containing proteinOHA_RS11785Not AvailableNegative2558389 - 255920428731.0
hypothetical proteinOHA_RS11790Not AvailablePositive2559561 - 255984510684.8

Displaying genes 2541 – 2550 of 4595 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.