Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | GJW30_RS04545 | Not Available | Positive | 953412 - 954719 | 47054.5 |
| sdr family nad(p)-dependent oxidoreductase | GJW30_RS04550 | Not Available | Positive | 954835 - 955599 | 27030.6 |
| calcium-binding protein | GJW30_RS04555 | Not Available | Positive | 955741 - 956802 | 37792.3 |
| abc transporter substrate-binding protein | GJW30_RS04560 | Not Available | Negative | 956982 - 958199 | 43067.2 |
| 50s ribosomal protein l21 | GJW30_RS04565 | Not Available | Positive | 958471 - 958881 | 14349.4 |
| 50s ribosomal protein l27 | GJW30_RS04570 | Not Available | Positive | 959015 - 959284 | 9408.18 |
| gnat family n-acetyltransferase | GJW30_RS04575 | Not Available | Positive | 959478 - 960083 | 22274.9 |
| gnat family n-acetyltransferase | GJW30_RS04580 | Not Available | Positive | 960170 - 960745 | 21270.3 |
| methionine--trna ligase | GJW30_RS04585 | Not Available | Positive | 960976 - 962655 | 62423.8 |
| sensor histidine kinase | GJW30_RS04590 | Not Available | Positive | 962839 - 964173 | 48130.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
