Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | GJW30_RS04495 | Not Available | Positive | 944796 - 945725 | 33500.6 |
| exodeoxyribonuclease vii small subunit | GJW30_RS04500 | Not Available | Positive | 945731 - 945982 | 9163.9 |
| hypothetical protein | GJW30_RS04505 | Not Available | Negative | 946143 - 946721 | 22174.3 |
| abc transporter atp-binding protein/permease | GJW30_RS04510 | Not Available | Negative | 946769 - 948505 | 63567.7 |
| hypothetical protein | GJW30_RS04515 | Not Available | Negative | 948549 - 949040 | 17637.5 |
| tlya family rna methyltransferase | GJW30_RS04520 | Not Available | Positive | 949122 - 949847 | 25744.2 |
| class i sam-dependent rna methyltransferase | GJW30_RS04525 | Not Available | Positive | 949840 - 951060 | 43582.5 |
| sdr family oxidoreductase | GJW30_RS04530 | Not Available | Negative | 951057 - 951845 | 27264.9 |
| j domain-containing protein | GJW30_RS04535 | Not Available | Positive | 951962 - 952441 | 17382.7 |
| nad(p)-dependent oxidoreductase | GJW30_RS04540 | Not Available | Positive | 952490 - 953401 | 33078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
