Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diguanylate cyclase/phosphodiesterase | GJW30_RS04200 | Not Available | Negative | 883810 - 885507 | 61725.8 |
| gamma-glutamyltransferase | GJW30_RS04205 | Not Available | Negative | 885663 - 887240 | 55776.9 |
| hypothetical protein | GJW30_RS04210 | Not Available | Negative | 887298 - 887702 | 14834.7 |
| 50s ribosomal protein l32 | GJW30_RS04215 | Not Available | Negative | 887944 - 888132 | 7106.69 |
| serine o-acetyltransferase | GJW30_RS04220 | Not Available | Positive | 888392 - 889114 | 25489.6 |
| sensor histidine kinase | GJW30_RS04225 | Not Available | Positive | 889173 - 891521 | 85894.9 |
| abc transporter substrate-binding protein | GJW30_RS04230 | Not Available | Positive | 891536 - 893122 | 58907.0 |
| chromosome segregation protein smc | GJW30_RS04235 | Not Available | Negative | 893123 - 896581 | 125207.0 |
| type ii toxin-antitoxin system vapc family toxin | GJW30_RS04240 | Not Available | Negative | 896838 - 897215 | 14113.3 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | GJW30_RS04245 | Not Available | Negative | 897212 - 897457 | 8926.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
