Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | GJW30_RS03500 | Not Available | Positive | 717442 - 719301 | 70236.2 |
| microcin c abc transporter permease yejb | GJW30_RS03505 | Not Available | Positive | 719321 - 720499 | 43466.5 |
| abc transporter permease | GJW30_RS03510 | Not Available | Positive | 720499 - 721710 | 44608.6 |
| abc transporter atp-binding protein | GJW30_RS03515 | Not Available | Positive | 721716 - 723341 | 59095.2 |
| rida family protein | GJW30_RS03520 | Not Available | Negative | 723469 - 723951 | 16948.8 |
| c-type cytochrome | GJW30_RS03525 | Not Available | Negative | 724217 - 724603 | 13685.6 |
| flavin monoamine oxidase family protein | GJW30_RS03530 | Not Available | Negative | 724610 - 726199 | 58210.3 |
| 2-hydroxyacid dehydrogenase | GJW30_RS03535 | Not Available | Positive | 726305 - 727252 | 34114.2 |
| hypothetical protein | GJW30_RS03540 | Not Available | Positive | 727434 - 727676 | 8870.21 |
| dna topoisomerase (atp-hydrolyzing) subunit b | GJW30_RS03545 | Not Available | Positive | 727849 - 730278 | 88846.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
